Publications
This list includes selected peer-reviewed journal articles, applied research outputs, and conference papers from my work in microfluidics, imaging-guided single-cell analysis, automation, and bioengineering.
Featured Research
See-N-Seq: Image-guided single-cell RNA sequencing
J.H. Lee, E.S. Park, J.R. Choi, K. Matthews, A.V. Lam, X. Deng, S.P. Duffy, H. Ma
Communications Biology, 5(1), 768 (2022)
➡️ A technique enabling single-cell RNA sequencing from visually identified cells using micropatterned hydrogel porosity.
Journal Articles
Automated rare sperm identification from low-magnification microscopy images
R. Lee, L. Witherspoon, M. Robinson, J.H. Lee, S.P. Duffy, R. Flannigan, H. Ma
Fertility and Sterility, 118(1), 90-99 (2022)
Image-based phenotyping of disaggregated cells using deep learning
S. Berryman, K. Matthews, J.H. Lee, S.P. Duffy, H. Ma
Communications Biology, 3(1), 674 (2020)
Monolithic hydrogel nanowells-in-microwells enabling single-cell secretion and phenotype analysis
J.R. Choi, J.H. Lee, A. Xu, K. Matthews, S. Xie, S.P. Duffy, H. Ma
Lab on a Chip, 20(24), 4539-4551 (2020)
Selective cell propagation via micropatterning of a thermally-activated hydrogel
J.C.Y. Chiu, J.A. Teodoro, J.H. Lee, K. Matthews, S.P. Duffy, H. Ma
Lab on a Chip, 20(9), 1544-1553 (2020)
Lossless immunocytochemistry using photo-polymerized hydrogel thin films
J.H. Lee, A.T. Santoso, E.S. Park, K. Matthews, S.P. Duffy, H. Ma
Analyst, 145(8), 2897-2903 (2020)
Isolation and genome sequencing of individual circulating tumor cells using hydrogel encapsulation and laser capture microdissection
E.S. Park, J.P. Yan, R.A. Ang, J.H. Lee, X. Deng, S.P. Duffy, K. Beja, M. Annala, ...
Lab on a Chip, 18(12), 1736-1749 (2018)
Microfluidics & MEMS Works (Earlier Research)
Microfluidic cell-phoresis enabling high-throughput deformability analysis
A.T. Santoso, X. Deng, J.H. Lee, K. Matthews, S.P. Duffy, E. Islamzada, ...
Lab on a Chip, 15(23), 4451-4460 (2015) — 35 citations
On-chip micromanipulation by AC-EWOD driven twin bubbles
J.H. Lee, K.H. Lee, J.B. Chae, K. Rhee, S.K. Chung
Sensors and Actuators A: Physical, 195, 167-174 (2013) — 22 citations
Micromanipulation using cavitational microstreaming generated by acoustically oscillating twin bubbles
K.H. Lee, J.H. Lee, J.M. Won, K. Rhee, S.K. Chung
Sensors and Actuators A: Physical, 188, 442-449 (2012) — 30 citations
Mobile oscillating bubble actuated by AC-EWOD for microfluidic mixing enhancement
J.H. Lee, K.H. Lee, J.M. Won, K. Rhee, S.K. Chung
Sensors and Actuators A: Physical, 182, 153-162 (2012) — 54 citations
Conference Proceedings
- Bubble-induced streaming for micro-object manipulation
J.H. Lee, K.H. Lee, J.B. Chae, K. Rhee, S.K. Chung
IEEE MEMS, 2012 - Novel tweezers using acoustically oscillating microbubbles (2011)
- Propulsion of floating objects using oscillating bubbles (2011)
Scholar Profile
A continuously updated publication list is available here: